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  5. GSVIVT01030448001

GSVIVT01030448001


Description : Dirigent protein 23 OS=Arabidopsis thaliana


Gene families : OG0000104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030448001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00176950 evm_27.TU.AmTr_v1... Dirigent protein 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00180610 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00041p00187460 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00134p00117580 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00547p00000030 evm_27.TU.AmTr_v1... Dirigent protein 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00913p00008360 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s01147p00007290 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s02715p00003910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G22900 No alias Disease resistance-responsive (dirigent-like protein)... 0.03 OrthoFinder output from all 47 species
Aev_g16961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g37296 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11775 No alias stereoselective coupling control protein *(DIRIGENT) &... 0.03 OrthoFinder output from all 47 species
Als_g31463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06818.t1 Aspi01Gene06818 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06869.t1 Aspi01Gene06869 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06870.t1 Aspi01Gene06870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06871.t1 Aspi01Gene06871 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06872.t1 Aspi01Gene06872 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28859.t1 Aspi01Gene28859 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene52081.t1 Aspi01Gene52081 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71256.t1 Aspi01Gene71256 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G030900.1 Ceric.14G030900 not classified & original description: pacid=50633510... 0.02 OrthoFinder output from all 47 species
GSVIVT01025393001 No alias Dirigent protein 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01025394001 No alias Dirigent protein 19 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_27541 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59440.1 LOC_Os03g59440 Dirigent protein 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g42500.1 LOC_Os11g42500 Dirigent protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g42550.1 LOC_Os11g42550 Dirigent protein 21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10428143g0010 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10429923g0010 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_120399g0010 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_130946g0010 No alias Disease resistance response protein 206 OS=Pisum sativum... 0.06 OrthoFinder output from all 47 species
Ppi_g61080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo6118 No alias Dirigent protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc07g042300.1.1 Solyc07g042300 Dirigent protein 21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g008900.3.1 Solyc10g008900 Dirigent protein 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004265 Dirigent 32 174
No external refs found!