GSVIVT01030430001 (ATG8C)


Aliases : ATG8C

Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030430001

Target Alias Description ECC score Gene Family Method Actions
Adi_g085507 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Als_g31042 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Aob_g02886 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G065300.1 ATG8F, Ceric.27G065300 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g689650 ATG8F Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
Dac_g11854 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26811 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32800.2 ATG8C, LOC_Os07g32800 ATG8 autophagosome ubiquitin-fold protein 0.06 OrthoFinder output from all 47 species
Len_g26188 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g30636 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
MA_30699g0010 ATG8F ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species
Mp1g21590.1 ATG8C ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Nbi_g00307 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05523 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ore_g05465 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002602 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!