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  5. GSVIVT01030338001

GSVIVT01030338001 (AtRLP54, RLP54)


Aliases : AtRLP54, RLP54

Description : Receptor-like protein 9DC3 OS=Solanum pimpinellifolium


Gene families : OG0006840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030338001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00234330 RLP53, AtRLP53,... Receptor-like protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030340001 AtRLP54, RLP54 Receptor-like protein 19 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
LOC_Os01g04070.1 AtRLP35, RLP35,... no description available(sp|q9srl2|rlp34_arath : 343.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g06750.1 LOC_Os01g06750 no description available(sp|f4kha2|rlp54_arath : 157.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g06790.1 AtRLP6, RLP6,... Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
LOC_Os01g06890.1 AtRLP47, RLP47,... Receptor like protein 27 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g28210.1 AtRLP54, RLP54,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g40440.1 RLP53, AtRLP53,... Receptor like protein 23 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g10930.1 LOC_Os12g10930 Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
LOC_Os12g11510.1 RLP26, AtRLP26,... Receptor-like protein 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g11940.1 RLP28, AtRLP28,... no description available(sp|q9srl2|rlp34_arath : 206.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g12120.1 LOC_Os12g12120 Receptor-like protein 19 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g12130.1 RLP27, AtRLP27,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc09g005080.1.1 RLP24, AtRLP24,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc09g005090.1.1 RLP7, AtRLP7,... Receptor-like protein 7 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Zm00001e040308_P001 RLP7, AtRLP7,... Receptor like protein 22 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 1824 1882
IPR001611 Leu-rich_rpt 284 342
IPR001611 Leu-rich_rpt 1935 1992
IPR001611 Leu-rich_rpt 359 418
IPR001611 Leu-rich_rpt 812 871
IPR001611 Leu-rich_rpt 1116 1175
IPR001611 Leu-rich_rpt 931 990
IPR001611 Leu-rich_rpt 1708 1727
IPR013210 LRR_N_plant-typ 485 523
IPR013210 LRR_N_plant-typ 1323 1362
No external refs found!