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  5. GSVIVT01030267001

GSVIVT01030267001


Description : Protein translocation.plasmodesmata intercellular trafficking.SIEL regulator protein


Gene families : OG0007306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030267001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00025400 evm_27.TU.AmTr_v1... Protein translocation.plasmodesmata intercellular... 0.02 OrthoFinder output from all 47 species
Adi_g055972 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species
Ceric.13G038600.1 Ceric.13G038600 regulatory protein *(SIEL) of plasmodesmata... 0.04 OrthoFinder output from all 47 species
Dcu_g19028 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species
Gb_07006 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g11530.1 No alias component DSP3 of DSP snRNA processing complex. SIEL... 0.06 OrthoFinder output from all 47 species
Solyc01g090260.5.1.1 Solyc01g090260 component DSP3 of DSP snRNA processing complex. SIEL... 0.07 OrthoFinder output from all 47 species
Spa_g53551 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!