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  5. GSVIVT01030117001

GSVIVT01030117001


Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 165.3) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum


Gene families : OG0005703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030117001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00196800 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.09 OrthoFinder output from all 47 species
AT3G07670 No alias Rubisco methyltransferase family protein 0.07 OrthoFinder output from all 47 species
Adi_g074160 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Aob_g24046 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009600 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.20G040500.1 Ceric.20G040500 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.100 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Dac_g19080 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Dde_g28311 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Gb_10725 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49326.1 LOC_Os02g49326 Enzyme classification.EC_2 transferases.EC_2.1... 0.09 OrthoFinder output from all 47 species
Lfl_g26901 No alias EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Msp_g16453 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ppi_g61927 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo80789 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Solyc07g045310.4.1 Solyc07g045310 Enzyme classification.EC_2 transferases.EC_2.1... 0.11 OrthoFinder output from all 47 species
Zm00001e023409_P003 Zm00001e023409 Enzyme classification.EC_2 transferases.EC_2.1... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 94 298
IPR015353 Rubisco_LSMT_subst-bd 331 464
No external refs found!