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Aliases : PAT1
Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor
Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g02325 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08305 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12229 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50028 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05274 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06178 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11032.t1 | PAT1, Aspi01Gene11032 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene38043.t1 | PAT1, Aspi01Gene38043 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031398 | SCL21 | GRAS-type transcription factor & original description: CDS=1-1998 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G109900.1 | PAT1, Ceric.01G109900 | GRAS-type transcription factor & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.39G021800.1 | PAT1, Ceric.39G021800 | GRAS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22968 | PAT1 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g05994 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08580 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02264 | PAT1 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g09280.2 | PAT1, LOC_Os03g09280 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12269 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20939 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06138 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10420 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06251 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04572 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031707_P001 | SCL1, Zm00001e031707 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | HCCA |
| BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
| BP | GO:0006021 | inositol biosynthetic process | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 123 | 484 |
| No external refs found! |