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  5. GSVIVT01029939001

GSVIVT01029939001 (VAR3)


Aliases : VAR3

Description : Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0018338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0018338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029939001

Target Alias Description ECC score Gene Family Method Actions
AT5G17790 VAR3 zinc finger (Ran-binding) family protein 0.06 OrthoFinder output from all 47 species
Solyc01g057780.3.1 VAR3, Solyc01g057780 RNA editing factor (OZ-type) 0.04 OrthoFinder output from all 47 species
Zm00001e028874_P001 VAR3, Zm00001e028874 RNA editing factor (OZ-type) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 307 333
IPR001876 Znf_RanBP2 273 300
No external refs found!