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  5. GSVIVT01029923001

GSVIVT01029923001


Description : NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Calycanthus floridus var. glaucus


Gene families : OG0009010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029923001

Target Alias Description ECC score Gene Family Method Actions
ATCG01090 NDHI NADPH dehydrogenases 0.11 OrthoFinder output from all 47 species
Aev_g16358 NDHI component *(NdhI) of NDH subcomplex A & original... 0.12 OrthoFinder output from all 47 species
Aob_g26428 NDHI component *(NdhI) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G044300.1 NDHI, Ceric.05G044300 component *(NdhI) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G045600.1 NDHI, Ceric.05G045600 component *(NdhI) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Dde_g03755 NDHI component *(NdhI) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
LOC_Os10g21398.1 NDHI, LOC_Os10g21398 component NdhI of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Lfl_g00413 NDHI component *(NdhI) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Ore_g00623 NDHI component *(NdhI) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
Pir_g18413 No alias component *(NdhI) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Sam_g21062 No alias component *(NdhI) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Smo137743 NDHI Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 OrthoFinder output from all 47 species
Solyc02g011780.3.1 NDHI, Solyc02g011780 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic... 0.15 OrthoFinder output from all 47 species
Solyc03g013615.1.1 NDHI, Solyc03g013615 component NdhI of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Solyc11g021220.2.1 NDHI, Solyc11g021220 component NdhI of NDH subcomplex A 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 59 77
No external refs found!