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  5. GSVIVT01029758001

GSVIVT01029758001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.RAE1 scaffold nucleoporin


Gene families : OG0004854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029758001

Target Alias Description ECC score Gene Family Method Actions
Cba_g10923 No alias scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.02 OrthoFinder output from all 47 species
Ceric.10G026000.1 Ceric.10G026000 scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.04 OrthoFinder output from all 47 species
Ore_g03634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 114 143
IPR001680 WD40_repeat 236 275
IPR001680 WD40_repeat 28 53
IPR001680 WD40_repeat 71 100
No external refs found!