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  5. GSVIVT01029694001

GSVIVT01029694001 (COP9, FUS7, EMB143, CSN8)


Aliases : COP9, FUS7, EMB143, CSN8

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN8 component


Gene families : OG0005444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029694001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04328.t2 COP9, FUS7,... component *(CSN8) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g04920 COP9, FUS7, EMB143, CSN8 component *(CSN8) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Gb_14322 COP9, FUS7, EMB143, CSN8 component CSN8 of COP9 signalosome complex 0.05 OrthoFinder output from all 47 species
Spa_g17599 COP9, FUS7, EMB143, CSN8 component *(CSN8) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e008129_P003 Zm00001e008129 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033464 CSN8_PSD8_EIF3K 39 177
No external refs found!