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  5. GSVIVT01029687001

GSVIVT01029687001


No description available


Gene families : OG0001424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029687001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g056270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g286500 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_17166 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g10404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g04810.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g02459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020101 No alias not classified & original description: CDS=1005-2906 0.04 OrthoFinder output from all 47 species
Sam_g15253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo446036 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g104480.4.1 Solyc01g104480 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!