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  5. GSVIVT01029528001

GSVIVT01029528001 (QRT3)


Aliases : QRT3

Description : Cell wall.pectin.modification and degradation.polygalacturonase activities.QRT3 polygalacturonase


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029528001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00319p00013650 QRT3,... Polygalacturonase QRT3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g16422 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g53005 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012138001 No alias Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425986g0020 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_8818361g0010 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_917578g0010 QRT3 polygalacturonase (QRT3) 0.06 OrthoFinder output from all 47 species
Mp7g18980.1 QRT3 polygalacturonase (QRT3) 0.02 OrthoFinder output from all 47 species
Msp_g12922 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009816 QRT3 polygalacturonase *(QRT3) & original description: CDS=14-1468 0.04 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 72 280
No external refs found!