1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029432001

GSVIVT01029432001


No description available


Gene families : OG0003745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003745_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029432001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00156850 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g014242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0442.g070355 No alias not classified & original description: CDS=6-3200 0.04 OrthoFinder output from all 47 species
Ceric.07G089300.1 Ceric.07G089300 not classified & original description: pacid=50627147... 0.03 OrthoFinder output from all 47 species
Ceric.31G026400.1 Ceric.31G026400 not classified & original description: pacid=50575060... 0.04 OrthoFinder output from all 47 species
Dcu_g11463 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436408g0010 No alias no description available(sp|d5lxj0|cip73_lotja : 109.0) 0.02 OrthoFinder output from all 47 species
MA_10437085g0010 No alias no description available(sp|d5lxj0|cip73_lotja : 126.0) 0.03 OrthoFinder output from all 47 species
Mp7g19730.1 No alias no description available(sp|d5lxj0|cip73_lotja : 174.0) 0.02 OrthoFinder output from all 47 species
Msp_g15179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo403529 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g082160.4.1 Solyc04g082160 no description available(sp|d5lxj0|cip73_lotja : 145.0) 0.04 OrthoFinder output from all 47 species
Spa_g38086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 26 95
No external refs found!