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  5. GSVIVT01029303001

GSVIVT01029303001


Description : Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana


Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029303001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252640 evm_27.TU.AmTr_v1... Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G28430 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aev_g39003 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34035 No alias membrane trafficking factor *(GFS9) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g30469 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06201.t1 Aspi01Gene06201 membrane trafficking factor *(GFS9) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06204.t1 Aspi01Gene06204 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42412.t1 Aspi01Gene42412 membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014134 No alias membrane trafficking factor *(GFS9) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z252700.1 Ceric.1Z252700 membrane trafficking factor *(GFS9) & original... 0.07 OrthoFinder output from all 47 species
Cre12.g515250 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g01968 No alias membrane trafficking factor *(GFS9) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04682 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g08189 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11932 No alias membrane trafficking factor *(GFS9) & original description: none 0.05 OrthoFinder output from all 47 species
MA_41930g0010 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g05320.1 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ppi_g31204 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015048 No alias membrane trafficking factor *(GFS9) & original... 0.03 OrthoFinder output from all 47 species
Sam_g18673 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g018100.2.1 Solyc07g018100 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g11706 No alias membrane trafficking factor *(GFS9) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 42 192
No external refs found!