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  5. GSVIVT01029266001

GSVIVT01029266001 (EIR1, WAV6, ATPIN2,...)


Aliases : EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029266001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AT1G77110 PIN6 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
Aev_g21847 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g26431 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34309 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52690 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06041 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g15414 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0043.g026982 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0076.g037837 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g18755 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010025001 PIN6 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
GSVIVT01019110001 PIN5 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os11g04190.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os12g04000.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Len_g27960 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12533 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29643 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33773 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28472 No alias auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g087660.4.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Spa_g23448 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 213 432
IPR004776 Mem_trans 10 70
No external refs found!