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  5. GSVIVT01029250001

GSVIVT01029250001


No description available


Gene families : OG0001798 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029250001

Target Alias Description ECC score Gene Family Method Actions
Adi_g003922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046664 No alias not classified & original description: CDS=428-733 0.03 OrthoFinder output from all 47 species
Ceric.37G032200.1 Ceric.37G032200 not classified & original description: pacid=50615863... 0.03 OrthoFinder output from all 47 species
Dcu_g18243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os12g03500.1 LOC_Os12g03500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g10090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c12_21250V3.1 Pp3c12_21250 Eukaryotic protein of unknown function (DUF872) 0.02 OrthoFinder output from all 47 species
Tin_g00189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025114_P001 Zm00001e025114 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006559 L-phenylalanine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008590 TMEM_230/134 28 101
No external refs found!