GSVIVT01029179001


Description : CASP-like protein 2C1 OS=Vitis vinifera


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029179001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.08 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT4G25830 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14656 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene18889.t1 Aspi01Gene18889 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.04 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.02 OrthoFinder output from all 47 species
Cba_g04991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.02 OrthoFinder output from all 47 species
Ceric.11G056300.1 Ceric.11G056300 not classified & original description: pacid=50596699... 0.04 OrthoFinder output from all 47 species
Ceric.34G063300.1 Ceric.34G063300 not classified & original description: pacid=50622926... 0.03 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02196 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08110.1 LOC_Os02g08110 CASP-like protein 2C2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os02g12760.1 LOC_Os02g12760 CASP-like protein 2D1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10030.1 LOC_Os03g10030 CASP-like protein Os03g0196400 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.06 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo272089 No alias CASP-like protein 2U6 OS=Selaginella moellendorffii 0.03 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006702 CASP_dom 50 200
No external refs found!