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  5. GSVIVT01029177001

GSVIVT01029177001 (ARR10, RR10)


Aliases : ARR10, RR10

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029177001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251530 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.02 OrthoFinder output from all 47 species
AT1G67710 ARR11 response regulator 11 0.05 OrthoFinder output from all 47 species
AT5G49240 APRR4, PRR4 pseudo-response regulator 4 0.04 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58078 MYBC1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50562.t1 Aspi01Gene50562 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65339.t1 ARR1, RR1,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49913 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G063700.1 ARR1, RR1,... subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G078100.1 LUX, PCL1,... MYB-RELATED transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G035500.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g01012 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Dcu_g16643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42857 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010627001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.06 OrthoFinder output from all 47 species
GSVIVT01035051001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
Gb_37200 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
MA_210494g0010 RR12, ARR12 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Msp_g02010 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24147 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09446 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39384 No alias subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo55684 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Solyc12g099380.3.1 ARR1, RR1, Solyc12g099380 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g51591 ARR10, RR10 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28299 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e018927_P001 ARR11, Zm00001e018927 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e019299_P002 Zm00001e019299 Transcription factor PCL1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 21 129
No external refs found!