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  5. GSVIVT01028978001

GSVIVT01028978001


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028978001

Target Alias Description ECC score Gene Family Method Actions
Adi_g011579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.02 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 12 138
No external refs found!