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  5. GSVIVT01028975001

GSVIVT01028975001


Description : Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028975001

Target Alias Description ECC score Gene Family Method Actions
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G15010 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.22G081200.1 Ceric.22G081200 not classified & original description: pacid=50614086... 0.02 OrthoFinder output from all 47 species
Gb_19514 No alias Pentatricopeptide repeat-containing protein At3g25210,... 0.04 OrthoFinder output from all 47 species
LOC_Os02g20160.1 LOC_Os02g20160 Putative pentatricopeptide repeat-containing protein... 0.11 OrthoFinder output from all 47 species
Pir_g00998 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc11g070040.3.1 Solyc11g070040 Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 331 378
IPR002885 Pentatricopeptide_repeat 401 449
IPR002885 Pentatricopeptide_repeat 460 502
IPR002885 Pentatricopeptide_repeat 265 305
No external refs found!