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  5. GSVIVT01028941001

GSVIVT01028941001 (TUB8)


Aliases : TUB8

Description : Tubulin beta-8 chain OS=Arabidopsis thaliana


  • Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

    Sequence : coding (download), protein (download)


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    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood HRR: GSVIVT01028941001

    Target Alias Description ECC score Gene Family Method Actions
    AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    AT2G29550 TUB7 tubulin beta-7 chain 0.07 OrthoFinder output from all 47 species
    AT5G12250 TUB6 beta-6 tubulin 0.03 OrthoFinder output from all 47 species
    AT5G62690 TUB2 tubulin beta chain 2 0.08 OrthoFinder output from all 47 species
    AT5G62700 TUB3 tubulin beta chain 3 0.1 OrthoFinder output from all 47 species
    Adi_g002835 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Adi_g028533 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Adi_g048866 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
    Adi_g055550 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Adi_g068860 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Adi_g105532 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
    Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Adi_g107584 TUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
    Aev_g20343 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Ala_g16994 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Ala_g31167 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Als_g10860 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Als_g18460 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Als_g27651 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Als_g33099 TUB6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
    Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Aob_g28171 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Aop_g64603 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Azfi_s0155.g053637 TUB6 not classified & original description: CDS=179-1075 0.03 OrthoFinder output from all 47 species
    Azfi_s0191.g057020 TUB6 not classified & original description: CDS=391-1311 0.03 OrthoFinder output from all 47 species
    Cba_g06879 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Cba_g15536 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Cba_g15537 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Cba_g69323 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Ceric.04G002000.1 TUB2, Ceric.04G002000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Ceric.31G054800.1 TUB2, Ceric.31G054800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Dac_g14314 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Dac_g34924 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Dcu_g05390 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Dcu_g08335 TUB7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
    Dcu_g31279 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Dde_g22132 TUB1 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    GSVIVT01019775001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
    GSVIVT01028948001 No alias Tubulin beta-9 chain OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
    Gb_15590 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
    Gb_18746 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
    LOC_Os02g07060.1 TUB8, LOC_Os02g07060 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
    LOC_Os05g34170.2 TUB6, LOC_Os05g34170 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
    Len_g06832 TUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
    Len_g08235 TUB6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
    Len_g08236 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Len_g17984 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Len_g18229 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Lfl_g06502 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    MA_10431251g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
    MA_179650g0010 TUB8 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 357.0) 0.02 OrthoFinder output from all 47 species
    MA_230579g0010 TUB1 Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.03 OrthoFinder output from all 47 species
    MA_230579g0020 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
    MA_251404g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
    MA_4935021g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 189.0) 0.02 OrthoFinder output from all 47 species
    MA_55439g0010 TUB2 Tubulin beta-1 chain OS=Solanum tuberosum... 0.04 OrthoFinder output from all 47 species
    MA_7436374g0010 TUB6 Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 OrthoFinder output from all 47 species
    MA_9578301g0010 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
    Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
    Ore_g04175 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Ore_g15539 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Ore_g16427 TUB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
    Pir_g03054 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Pir_g19218 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Ppi_g62362 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
    Sacu_v1.1_s0102.g019857 TUB6 not classified & original description: CDS=1-933 0.03 OrthoFinder output from all 47 species
    Sam_g08880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Sam_g09016 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Sam_g16934 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Sam_g50177 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
    Solyc06g076640.3.1 TUB8, Solyc06g076640 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
    Spa_g20474 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Spa_g24819 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Spa_g48008 TUB8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
    Spa_g50619 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
    Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
    Spa_g54936 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Tin_g05083 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
    Tin_g19305 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
    Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
    Zm00001e011926_P001 TUB8, Zm00001e011926 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
    Zm00001e037773_P002 TUB2, Zm00001e037773 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source
    MF GO:0003924 GTPase activity IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0003682 chromatin binding IEP HCCA
    MF GO:0030246 carbohydrate binding IEP HCCA
    InterPro domains Description Start Stop
    IPR018316 Tubulin/FtsZ_2-layer-sand-dom 191 278
    IPR003008 Tubulin_FtsZ_GTPase 30 134
    No external refs found!