GSVIVT01028921001


Description : Cell wall.pectin.modification and degradation.pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028921001

Target Alias Description ECC score Gene Family Method Actions
AT4G19420 No alias Pectinacetylesterase family protein 0.05 OrthoFinder output from all 47 species
Ala_g27630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62263 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69681 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435510g0010 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022387 No alias pectin acetylesterase *(PAE) & original description: CDS=96-1526 0.03 OrthoFinder output from all 47 species
Spa_g06322 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25230 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 21 372
No external refs found!