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  5. GSVIVT01028905001

GSVIVT01028905001


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028905001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT5G02540 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t2 Aspi01Gene16465 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40212.t1 Aspi01Gene40212 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56850.t1 Aspi01Gene56850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63405.t1 Aspi01Gene63405 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69014.t1 Aspi01Gene69014 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0419.g069131 No alias not classified & original description: CDS=35-1039 0.04 OrthoFinder output from all 47 species
Cba_g34321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48384 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
MA_78644g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ore_g37040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc03g112540.4.1 Solyc03g112540 Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc08g082870.3.1 Solyc08g082870 Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!