1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01028739001

GSVIVT01028739001


Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028739001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.69 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.60 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g401812 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39815 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g20539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032337001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os04g49320.1 LOC_Os04g49320 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39230.1 LOC_Os10g39230 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_245976g0010 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g18276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!