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  5. GSVIVT01028736001

GSVIVT01028736001


Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028736001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.69 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre09.g401812 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g39815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032337001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os10g39230.1 LOC_Os10g39230 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g013590.2.1 Solyc12g013590 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g013600.3.1 Solyc12g013600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g18276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!