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  5. GSVIVT01028710001

GSVIVT01028710001


Description : Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana


Gene families : OG0000682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028710001

Target Alias Description ECC score Gene Family Method Actions
AT5G10740 No alias Protein phosphatase 2C family protein 0.06 OrthoFinder output from all 47 species
Adi_g024953 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111566 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02269 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46050 WIN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g15594.1 LOC_Os02g15594 Probable protein phosphatase 2C member 13, mitochondrial... 0.03 OrthoFinder output from all 47 species
Mp4g00910.1 WIN2 Probable protein phosphatase 2C 59 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ppi_g06216 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009643 WIN2 clade F phosphatase & original description: CDS=131-997 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022663 No alias clade F phosphatase & original description: CDS=476-1387 0.04 OrthoFinder output from all 47 species
Zm00001e013668_P001 WIN2, Zm00001e013668 Probable protein phosphatase 2C 10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 92 329
No external refs found!