GSVIVT01028643001 (PRT1)


Aliases : PRT1

Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-II-residues E3 ubiquitin ligase (PRT1)


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028643001

Target Alias Description ECC score Gene Family Method Actions
AT3G24800 PRT1 proteolysis 1 0.01 OrthoFinder output from all 47 species
Cba_g16445 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.01 OrthoFinder output from all 47 species
Ceric.20G064900.1 PRT1, Ceric.20G064900 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.06 OrthoFinder output from all 47 species
Len_g29419 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Len_g50532 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.01 OrthoFinder output from all 47 species
Msp_g05169 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000433 Znf_ZZ 313 350
No external refs found!