GSVIVT01028555001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028555001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00138p00067840 ZFP7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT2G37740 ZFP10, ATZFP10 zinc-finger protein 10 0.04 OrthoFinder output from all 47 species
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 OrthoFinder output from all 47 species
Adi_g033743 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g116825 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g16389 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g27336 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g28126 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g59361 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g06314 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03058.t1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22629.t1 Aspi01Gene22629 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22630.t1 Aspi01Gene22630 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23411.t1 ZFP3, Aspi01Gene23411 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32392.t1 Aspi01Gene32392 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32976.t1 Aspi01Gene32976 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51187.t1 ZFP6, Aspi01Gene51187 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene60683.t1 Aspi01Gene60683 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene60689.t1 Aspi01Gene60689 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62498.t1 ZFP1, ATZFP1,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene67787.t2 ZFP6, Aspi01Gene67787 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035758 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g01929 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g28748 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.08G034400.1 ZFP1, ATZFP1,... C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g31422 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g39982 ZFP8 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g47144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00776 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13927 GIS2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01016493001 RAB, RBE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01027720001 SUP, FLO10, FON1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_27734 ZFP10, ATZFP10 Zinc finger protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g04120.1 LOC_Os01g04120 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g01090.1 RAB, RBE, LOC_Os02g01090 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g42250.1 LOC_Os12g42250 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g10074 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g13450 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g15169 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.07 OrthoFinder output from all 47 species
Len_g51208 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_110160g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25140.1 ZFP11, ATZFP11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g42122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10608 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g10922 ZFP11, ATZFP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30209 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g34996 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g36220 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g41060 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g10211 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g21478 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g29174 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pnu_g18548 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05059 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021695 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023323 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g08899 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc05g006310.3.1 ZFP5, Solyc05g006310 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc05g009180.1.1 Solyc05g009180 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g009380.4.1 JAG, Solyc05g009380 Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g078990.1.1 GIS, Solyc10g078990 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g084910.3.1 TAC1, Solyc10g084910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011890.2.1 ZFP4, Solyc11g011890 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Tin_g08791 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g38082 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005137_P001 ZFP7, Zm00001e005137 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e010687_P001 ZFP7, Zm00001e010687 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e012453_P001 ZFP1, ATZFP1,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e032639_P001 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e040940_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!