GSVIVT01028411001 (SDG18, SUVR2)

Aliases : SDG18, SUVR2

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component

Gene families : OG0002277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002277_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028411001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s04272p00004560	SDG18, SUVR2,...	No description available	0.04	OrthoFinder output from all 47 species
AT5G43990	SDG18, SUVR2	SET-domain containing protein lysine methyltransferase...	0.06	OrthoFinder output from all 47 species
Adi_g117467	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Cba_g07666	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Dde_g43266	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Ehy_g18264	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
GSVIVT01027907001	SUVR4, SDG31	Chromatin organisation.histone modifications.histone...	0.04	OrthoFinder output from all 47 species
Len_g13299	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
MA_106792g0010	SUVR4, SDG31	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Ppi_g15287	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Solyc09g072890.2.1	SDG18, SUVR2,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Solyc09g090630.3.1	SUVR4, SDG31,...	class V/Su(var) histone methyltransferase component of...	0.05	OrthoFinder output from all 47 species
Spa_g06244	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Spa_g07088	SUVR4, SDG31	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Zm00001e003847_P002	SUVR4, SDG31,...	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	556	678
IPR018848	WIYLD_domain	4	59
IPR007728	Pre-SET_dom	389	536

External Links

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GSVIVT01028411001 (SDG18, SUVR2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation