- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PKDM7D
Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor
Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00062020 | PKDM7D,... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G08620 | PKDM7D | Transcription factor jumonji (jmj) family protein / zinc... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G63490 | No alias | transcription factor jumonji (jmjC) domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G38950 | No alias | Transcription factor jumonji (jmj) family protein / zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G20400 | PKDM7B, JMJ14 | JUMONJI 14 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055868 | No alias | histone demethylase *(KDM5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g23898 | PKDM7D | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28386.t1 | Aspi01Gene28386 | histone demethylase *(KDM5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0103.g044628 | PKDM7D | histone demethylase *(PKDM7) & original description: CDS=238-3396 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G024900.1 | Ceric.01G024900 | histone demethylase *(KDM5) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g08688 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g10770.1 | PKDM7D, LOC_Os05g10770 | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14189 | No alias | histone demethylase *(KDM5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18977 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_11526g0010 | No alias | Putative lysine-specific demethylase JMJ16... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17910.1 | No alias | histone demethylase (KDM5). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17312 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15994 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g11634 | No alias | histone demethylase *(KDM5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g081000.3.1 | Solyc08g081000 | histone demethylase (KDM5). transcription factor (JUMONJI) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |