Aliases : TTN8, ATSMC1, SMC1
Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component
Gene families : OG0004293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00208430 | TTN8, ATSMC1,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00047p00208850 | TTN8, ATSMC1,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
AT3G54670 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes (SMC) family protein | 0.09 | OrthoFinder output from all 47 species | |
Adi_g010815 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g04880 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g02668 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g01964 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.09 | OrthoFinder output from all 47 species | |
Aob_g04491 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.32G063300.1 | TTN8, ATSMC1,... | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.1 | OrthoFinder output from all 47 species | |
Cre15.g635800 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes protein 1... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g13201 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g44390.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.12 | OrthoFinder output from all 47 species | |
MA_10429667g0010 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes protein 1... | 0.05 | OrthoFinder output from all 47 species | |
Mp1g29090.1 | TTN8, ATSMC1, SMC1 | component SMC1/TTN8 of cohesin regulator complex | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15568 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g13217 | TTN8, ATSMC1, SMC1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g01407 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g07221 | No alias | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g38474 | No alias | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g083870.3.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.04 | OrthoFinder output from all 47 species | |
Spa_g10305 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e003843_P001 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0051276 | chromosome organization | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
No external refs found! |