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  5. GSVIVT01028303001

GSVIVT01028303001 (CDT1, ATCDT1A, CDT1A)


Aliases : CDT1, ATCDT1A, CDT1A

Description : Cell cycle.interphase.DNA replication.preinitiation.CDT1 helicase auxiliary factor


Gene families : OG0007109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028303001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00068790 CDT1, ATCDT1A,... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.04 OrthoFinder output from all 47 species
AT2G31270 CDT1, ATCDT1A, CDT1A homolog of yeast CDT1 A 0.05 OrthoFinder output from all 47 species
Aop_g05243 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.06 OrthoFinder output from all 47 species
Cre03.g163300 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.01 OrthoFinder output from all 47 species
Gb_04601 CDT1, ATCDT1A, CDT1A helicase auxiliary factor (CDT1) 0.2 OrthoFinder output from all 47 species
LOC_Os04g10650.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.04 OrthoFinder output from all 47 species
LOC_Os10g34820.2 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.04 OrthoFinder output from all 47 species
MA_114779g0010 CDT1B, CDT1, ATCDT1B helicase auxiliary factor (CDT1) 0.02 OrthoFinder output from all 47 species
MA_9011g0010 CDT1, ATCDT1A, CDT1A helicase auxiliary factor (CDT1) 0.05 OrthoFinder output from all 47 species
Msp_g13606 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25997 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000487 CDT1, ATCDT1A, CDT1A helicase auxiliary factor *(CDT1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g27532 No alias helicase auxiliary factor *(CDT1) & original description: none 0.05 OrthoFinder output from all 47 species
Smo403930 CDT1, ATCDT1A, CDT1A Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.05 OrthoFinder output from all 47 species
Solyc03g019960.3.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.02 OrthoFinder output from all 47 species
Solyc06g008510.3.1 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.03 OrthoFinder output from all 47 species
Zm00001e036500_P001 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.17 OrthoFinder output from all 47 species
Zm00001e041798_P001 CDT1, ATCDT1A,... helicase auxiliary factor (CDT1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR032054 Cdt1_C 498 590
IPR014939 CDT1_Gemini-bd-like 182 248
No external refs found!