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  5. GSVIVT01028272001

GSVIVT01028272001


Description : Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease


Gene families : OG0001586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028272001
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT4G01610 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g128063 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001484.6 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.6 No alias Cathepsin B-like protease 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g31750 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Nbi_g18918 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2577.g028404 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g09086 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g46207 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEA Interproscan
BP GO:0050790 regulation of catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 154 369
IPR012599 Propeptide_C1A 39 80
No external refs found!