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  5. GSVIVT01028207001

GSVIVT01028207001 (ATPDR13, PDR13)


Aliases : ATPDR13, PDR13

Description : Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028207001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00085720 PDR4, ATPDR4,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Als_g49455 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11576 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37548 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56716 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28061.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32921 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30091 PDR6, ATPDR6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g36774 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017197001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01017200001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01017337001 ABCG40, PDR12,... ABC transporter G family member 40 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034745001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
GSVIVT01034748001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_15493 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g08260.1 PDR4, ATPDR4,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g35849 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_184352g0010 ABCG40, PDR12,... ABC transporter G family member 36 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_38272g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_954551g0010 PDR1, ATPDR1 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Pir_g28590 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59241 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000037 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=400-4878 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=697-5283 0.03 OrthoFinder output from all 47 species
Spa_g28903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039353_P001 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 160 270
No external refs found!