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Aliases : LHCB1.5, LHB1B2
Description : Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum
Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01028204001 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00136650 | LHCB1.5, LHB1B2,... | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00006p00251360 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00069900 | LHCB1.5, LHB1B2,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00070890 | CAB3, AB180,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00076p00074970 | LHCB1.3, CAB140,... | Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00153p00078810 | LHCB3*1, LHCB3,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13119 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14415 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18116 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g22172 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene23121.t1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene32417.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene32418.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene32419.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35945.t1 | LHCB5, Aspi01Gene35945 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene53662.t1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene62512.t1 | LHCB2.1, LHCB2,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene62745.t1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene66566.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013388 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026913 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042334 | LHCB5 | component *(LHCb5) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04979 | LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07197 | LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g19837 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05837 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23732 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17713 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g23886 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23887 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g27642 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| MA_10431300g0020 | LHCB2.2, LHCB2 | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
| MA_9388552g0010 | LHCB2.2, LHCB2 | Chlorophyll a-b binding protein type 2 member 2... | 0.03 | OrthoFinder output from all 47 species | |
| MA_97315g0010 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g05193 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07353 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07354 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07999 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g30962 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g37222 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37223 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28982 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32299 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g06072 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo75552 | LHCB2.3, LHCB2, LHCB2.4 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10843 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g13888 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020625_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein 48, chloroplastic OS=Zea... | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| No external refs found! |