GSVIVT01028179001 (ARFA1E, ATARFA1E)

Aliases : ARFA1E, ATARFA1E

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028179001

Target	Alias	Description	ECC score	Gene Family Method
AT1G70490	ARFA1D, ATARFA1D	Ras-related small GTP-binding family protein	0.07	OrthoFinder output from all 47 species
AT2G47170	ARF1A1C	Ras-related small GTP-binding family protein	0.05	OrthoFinder output from all 47 species
Adi_g024167	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g110620	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07015	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.25G015600.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.129	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Ehy_g26837	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os07g12200.1	ARF1A1C, LOC_Os07g12200	ARF-GTPase	0.04	OrthoFinder output from all 47 species
Msp_g34046	ATARFA1F, ARFA1F	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g100860.3.1	ARFA1E,...	ARF-GTPase	0.05	OrthoFinder output from all 47 species
Solyc01g100870.3.1	ARF1A1C, Solyc01g100870	ARF-GTPase	0.08	OrthoFinder output from all 47 species
Spa_g49718	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009391_P001	ARF1A1C, Zm00001e009391	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e011790_P001	ATARFA1B,...	ARF-GTPase	0.04	OrthoFinder output from all 47 species
Zm00001e033127_P003	ARF1A1C, Zm00001e033127	ARF-GTPase	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005319	lipid transporter activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0120009	intermembrane lipid transfer	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	1	156

External Links

No external refs found!

GSVIVT01028179001 (ARFA1E, ATARFA1E)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation