Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Arabidopsis thaliana
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G32490 | ESP3, EMB2733 | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g060167 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g11422 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g27800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g23007 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g29988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g01347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13922 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g64809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s2562.g112176 | No alias | not classified & original description: CDS=195-1934 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g33796 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G036900.1 | Ceric.15G036900 | RNA helicase *(Prp22) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.21G075900.1 | EMB3011, Ceric.21G075900 | RNA helicase *(Prp16) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000842.2 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000984.27 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021589.28 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
Cre07.g329150 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g349100 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
Cre24.g755347 | EMB3011 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g16924 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g13249 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g20664 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g42294 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
Gb_22388 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.04 | OrthoFinder output from all 47 species | |
Gb_30670 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g19960.1 | LOC_Os03g19960 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g32430.1 | EMB3011, LOC_Os07g32430 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Len_g08915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10428112g0030 | FAS4, ATFAS4 | ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_277016g0010 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
MA_629782g0010 | EMB3011 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.05 | OrthoFinder output from all 47 species | |
Mp1g21130.1 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
Mp4g02780.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
Mp7g03460.1 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10443 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g10948 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g07573 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g17516 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g115390.4.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g015040.4.1 | Solyc05g015040 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001487_P003 | Zm00001e001487 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e022095_P001 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028404_P001 | Zm00001e028404 | RNA helicase (Prp22) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e036358_P005 | Zm00001e036358 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038305_P001 | Zm00001e038305 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |