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  5. GSVIVT01028061001

GSVIVT01028061001


Description : Pathogenesis-related protein STH-2 OS=Solanum tuberosum


Gene families : OG0000135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028061001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00186060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g019002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15057 No alias MLP-like protein 423 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_15058 No alias MLP-like protein 423 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g21850.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g25440.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp8g10150.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g18910.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g08457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45382 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g16054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 50 157
No external refs found!