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  5. GSVIVT01028049001

GSVIVT01028049001 (RHS13)


Aliases : RHS13

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.proline-rich proteins (PRPs).glycoprotein


Gene families : OG0001735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001735_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028049001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00169090 evm_27.TU.AmTr_v1... Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G54970 RHS7, ATPRP1, PRP1 proline-rich protein 1 0.03 OrthoFinder output from all 47 species
AT2G33790 AGP30, ATAGP30 arabinogalactan protein 30 0.05 OrthoFinder output from all 47 species
AT2G47530 No alias Pollen Ole e 1 allergen and extensin family protein 0.05 OrthoFinder output from all 47 species
AT2G47540 No alias Pollen Ole e 1 allergen and extensin family protein 0.06 OrthoFinder output from all 47 species
AT3G09925 No alias Pollen Ole e 1 allergen and extensin family protein 0.04 OrthoFinder output from all 47 species
AT3G62680 ATPRP3, PRP3 proline-rich protein 3 0.04 OrthoFinder output from all 47 species
AT4G02270 RHS13 root hair specific 13 0.04 OrthoFinder output from all 47 species
AT5G05500 No alias Pollen Ole e 1 allergen and extensin family protein 0.04 OrthoFinder output from all 47 species
Als_g36044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013920 No alias not classified & original description: CDS=174-731 0.04 OrthoFinder output from all 47 species
Ceric.02G038400.1 Ceric.02G038400 not classified & original description: pacid=50585766... 0.04 OrthoFinder output from all 47 species
Ceric.02G099000.1 Ceric.02G099000 not classified & original description: pacid=50584642... 0.03 OrthoFinder output from all 47 species
Ceric.13G058200.1 Ceric.13G058200 not classified & original description: pacid=50635929... 0.03 OrthoFinder output from all 47 species
Ceric.16G041100.1 Ceric.16G041100 not classified & original description: pacid=50589734... 0.03 OrthoFinder output from all 47 species
Ceric.24G030400.1 Ceric.24G030400 not classified & original description: pacid=50628660... 0.04 OrthoFinder output from all 47 species
Ceric.31G038000.1 Ceric.31G038000 not classified & original description: pacid=50574287... 0.05 OrthoFinder output from all 47 species
Ceric.36G063000.1 AGP31, Ceric.36G063000 not classified & original description: pacid=50568982... 0.03 OrthoFinder output from all 47 species
Ceric.36G064400.1 AGP31, Ceric.36G064400 not classified & original description: pacid=50569173... 0.03 OrthoFinder output from all 47 species
Dcu_g14368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g34314 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g06940.1 LOC_Os01g06940 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g06960.1 LOC_Os01g06960 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g06980.1 LOC_Os01g06980 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g06990.1 LOC_Os01g06990 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g07010.1 LOC_Os01g07010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g07020.1 LOC_Os01g07020 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g07030.1 LOC_Os01g07030 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g07040.1 LOC_Os01g07040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g07050.1 LOC_Os01g07050 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g07060.1 LOC_Os01g07060 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g52660.1 LOC_Os01g52660 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g45460.1 LOC_Os05g45460 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os05g45480.1 LOC_Os05g45480 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g39890.1 LOC_Os10g39890 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_17693g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g38807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo422149 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo429316 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo431381 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo431382 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo449075 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g008590.4.1 Solyc09g008590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g075410.4.1 Solyc09g075410 cell wall glycoprotein 0.03 OrthoFinder output from all 47 species
Spa_g41356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002269_P001 Zm00001e002269 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e016825_P001 Zm00001e016825 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e019925_P001 Zm00001e019925 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e019927_P001 Zm00001e019927 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028211_P001 Zm00001e028211 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e032167_P001 Zm00001e032167 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e032168_P001 Zm00001e032168 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!