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  5. GSVIVT01028031001

GSVIVT01028031001 (U1A)


Aliases : U1A

Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1A snRNP component


Gene families : OG0003415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028031001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.87 No alias U2 small nuclear ribonucleoprotein B OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Pir_g00324 No alias component *(U2B) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g075200.4.1 U1A, Solyc09g075200 component U1A of U1 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 160 222
IPR000504 RRM_dom 3 73
No external refs found!