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  5. GSVIVT01027938001

GSVIVT01027938001 (GATB)


Aliases : GATB

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component


Gene families : OG0003791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027938001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00150510 GATB,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
AT1G48520 GATB GLU-ADT subunit B 0.13 OrthoFinder output from all 47 species
Adi_g022222 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Als_g13549 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Aob_g15473 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Cba_g02016 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079300.1 GATB, Ceric.1Z079300 component *(GatB) of glutamyl-tRNA-dependent... 0.09 OrthoFinder output from all 47 species
Cre14.g627488 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder output from all 47 species
Dcu_g32346 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Dde_g08532 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g02738 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os11g34210.2 GATB, LOC_Os11g34210 component GatB of glutamyl-tRNA-dependent... 0.12 OrthoFinder output from all 47 species
Lfl_g11055 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
MA_6978g0020 GATB component GatB of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
MA_889802g0010 GATB component GatB of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Mp1g29210.1 GATB component GatB of glutamyl-tRNA-dependent... 0.09 OrthoFinder output from all 47 species
Msp_g15572 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Nbi_g13336 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Ppi_g01136 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025293 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g09704 No alias component *(GatB) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Smo120349 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Smo441971 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Solyc09g090840.3.1 GATB, Solyc09g090840 component GatB of glutamyl-tRNA-dependent... 0.19 OrthoFinder output from all 47 species
Spa_g37335 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Zm00001e024183_P002 GATB, Zm00001e024183 component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018027 Asn/Gln_amidotransferase 208 295
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 1 168
No external refs found!