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  5. GSVIVT01027840001

GSVIVT01027840001


Description : COP1-interacting protein 7 OS=Arabidopsis thaliana


Gene families : OG0001164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027840001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00089960 evm_27.TU.AmTr_v1... COP1-interacting protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G61100 No alias disease resistance protein (TIR class), putative 0.05 OrthoFinder output from all 47 species
AT4G27430 CIP7 COP1-interacting protein 7 0.03 OrthoFinder output from all 47 species
Adi_g045932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14173 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09524.t1 CIP7, Aspi01Gene09524 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28609.t1 Aspi01Gene28609 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030654 CIP7 not classified & original description: CDS=437-934 0.03 OrthoFinder output from all 47 species
Dac_g08946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g64320.1 LOC_Os03g64320 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g06761 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427017g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g44242 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20744 CIP7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006451_P001 Zm00001e006451 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033400_P001 Zm00001e033400 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!