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  5. GSVIVT01027823001

GSVIVT01027823001


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027823001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00031410 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
AT3G47660 No alias Regulator of chromosome condensation (RCC1) family protein 0.02 OrthoFinder output from all 47 species
AT5G12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Aop_g33314 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65114.t1 Aspi01Gene65114 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0167.g054488 No alias not classified & original description: CDS=1991-5185 0.03 OrthoFinder output from all 47 species
Cba_g15359 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07174 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17460 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_27545 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Lfl_g19874 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39361 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017246 No alias not classified & original description: CDS=1-3951 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022141 No alias not classified & original description: CDS=662-3931 0.03 OrthoFinder output from all 47 species
Sam_g30101 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g005590.2.1 Solyc03g005590 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 283 331
IPR000408 Reg_chr_condens 557 603
IPR000408 Reg_chr_condens 503 552
IPR000408 Reg_chr_condens 454 500
IPR000408 Reg_chr_condens 389 438
IPR000408 Reg_chr_condens 334 385
IPR013591 Brevis_radix_dom 977 1031
IPR000306 Znf_FYVE 608 674
No external refs found!