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  5. GSVIVT01027535001

GSVIVT01027535001 (GRF9, AtGRF9)


Aliases : GRF9, AtGRF9

Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GRF transcription factor component


Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027535001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00257830 GRF2, AtGRF2,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.01 OrthoFinder output from all 47 species
AMTR_s00040p00189460 GRF4, AtGRF4,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.01 OrthoFinder output from all 47 species
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.02 OrthoFinder output from all 47 species
AT5G53660 AtGRF7, GRF7 growth-regulating factor 7 0.01 OrthoFinder output from all 47 species
Adi_g059082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22371.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0197.g057383 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.08 OrthoFinder output from all 47 species
Azfi_s0256.g060519 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Cba_g07600 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Cba_g09120 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Cba_g15543 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ceric.15G044200.1 GRF3, AtGRF3,... component *(GRF) of GRF-GIF transcriptional complex &... 0.01 OrthoFinder output from all 47 species
Dcu_g14903 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g19232 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01038629001 AtGRF7, GRF7 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
Gb_20443 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g47140.1 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g35030.1 GRF2, AtGRF2,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Len_g36239 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g38721 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ore_g33197 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000754 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011382 No alias not classified & original description: CDS=103-1059 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023900 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Sam_g37566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091540.3.1 GRF9, AtGRF9,... component GRF of GRF-GIF transcriptional complex 0.01 OrthoFinder output from all 47 species
Solyc08g005430.3.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Solyc10g083510.2.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.01 OrthoFinder output from all 47 species
Solyc12g096070.2.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Spa_g06684 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Tin_g11764 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.01 OrthoFinder output from all 47 species
Tin_g45753 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e011207_P003 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Zm00001e029851_P005 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e036657_P001 GRF6, AtGRF6,... component GRF of GRF-GIF transcriptional complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014977 WRC_dom 53 95
IPR014977 WRC_dom 299 335
No external refs found!