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  5. GSVIVT01027519001

GSVIVT01027519001


Description : U-box domain-containing protein 3 OS=Arabidopsis thaliana


Gene families : OG0001298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027519001

Target Alias Description ECC score Gene Family Method Actions
AT1G01830 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g021871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034858 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Ceric.37G015800.1 Ceric.37G015800 not classified & original description: pacid=50616846... 0.06 OrthoFinder output from all 47 species
Lfl_g07361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g12880.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g31267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439556 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g097740.1.1 Solyc03g097740 U-box domain-containing protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g08430 No alias regulatory protein *(ARO) of RenGAP activity & original... 0.04 OrthoFinder output from all 47 species
Zm00001e009429_P002 Zm00001e009429 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013053_P001 Zm00001e013053 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 393 431
No external refs found!