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Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana
Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01027434001 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G22330 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G33470 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G46780 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G54770 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18787 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene63711.t1 | Aspi01Gene63711 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13416 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.33G044200.1 | Ceric.33G044200 | not classified & original description: pacid=50606527... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06201 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_1682g0010 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g19046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001294_P001 | Zm00001e001294 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 18 | 75 |
| No external refs found! |