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  5. GSVIVT01027398001

GSVIVT01027398001


No description available


Gene families : OG0005808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027398001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT3G61870 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 OrthoFinder output from all 47 species
Aob_g03017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.37G062800.1 Ceric.37G062800 not classified & original description: pacid=50615895... 0.11 OrthoFinder output from all 47 species
Cre12.g519300 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g26013 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g29399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23361 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
MA_80427g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g18960.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g08151 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g08152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04336 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g20325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006226 No alias not classified & original description: CDS=1-822 0.08 OrthoFinder output from all 47 species
Solyc01g096240.4.1 Solyc01g096240 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e025267_P001 Zm00001e025267 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025067 DUF4079 89 266
No external refs found!