GSVIVT01027197001

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type

Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01027197001
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268880	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
AMTR_s00041p00118190	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
AMTR_s00053p00044540	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Ala_g02598	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15318	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene57056.t1	PUB44, SAUL1,...	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010890	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: CDS=175-3234	0.03	OrthoFinder output from all 47 species
Azfi_s0021.g015762	No alias	E3 ubiquitin ligase *(SAUL) & original description: CDS=1-3144	0.05	OrthoFinder output from all 47 species
Cba_g05320	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.09G008100.1	PUB44, SAUL1,...	E3 ubiquitin ligase *(SAUL) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G068400.1	PUB26, Ceric.13G068400	E3 ubiquitin ligase *(SAUL) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G052400.1	Ceric.25G052400	E3 ubiquitin ligase *(SAUL) & original description:...	0.06	OrthoFinder output from all 47 species
Dde_g00947	PUB9, ATPUB9	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g01743	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g72000.1	LOC_Os01g72000	E3 ubiquitin ligase (PUB)	0.07	OrthoFinder output from all 47 species
MA_63057g0020	No alias	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Mp1g08920.1	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Pir_g16538	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g09071	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36509	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g12195	No alias	E3 ubiquiTin ligase *(SAUL) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g29203	PUB44, SAUL1, ATPUB44	E3 ubiquiTin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	265	331

External Links

No external refs found!

GSVIVT01027197001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation