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  5. GSVIVT01027014001

GSVIVT01027014001 (ATCHIA, CHIA)


Aliases : ATCHIA, CHIA

Description : Acidic endochitinase OS=Nicotiana tabacum


Gene families : OG0001372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027014001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00238430 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00104690 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AMTR_s00095p00105100 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AMTR_s00095p00172710 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00033060 ATCHIA, CHIA,... Hevamine-A OS=Hevea brasiliensis 0.04 OrthoFinder output from all 47 species
Aspi01Gene29088.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g47070.1 ATCHIA, CHIA,... Acidic endochitinase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64110.1 ATCHIA, CHIA,... Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 333.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g15850.1 ATCHIA, CHIA,... no description available(sp|q5wmw5|xip_orysj : 362.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g47500.1 ATCHIA, CHIA,... Xylanase inhibitor protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os11g47520.1 ATCHIA, CHIA,... Xylanase inhibitor protein 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os11g47530.1 LOC_Os11g47530 Xylanase inhibitor protein 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os11g47550.1 ATCHIA, CHIA,... Xylanase inhibitor protein 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os11g47560.1 ATCHIA, CHIA,... Xylanase inhibitor protein 2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Mp2g03650.1 ATCHIA, CHIA Acidic endochitinase SE2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Mpzg00570.1 ATCHIA, CHIA Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 244.0) 0.02 OrthoFinder output from all 47 species
Zm00001e019204_P001 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 28 188
No external refs found!