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  5. GSVIVT01026884001

GSVIVT01026884001


Description : Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026884001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00005p00210680 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Aspi01Gene22043.t1 Aspi01Gene22043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g29550.1 LOC_Os04g29550 Putative ripening-related protein 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34840.1 LOC_Os10g34840 Ripening-related protein 3 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Len_g49301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo430105 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g048790.1.1 Solyc05g048790 no description available(sp|a0a1d6gnr3|kwl1_maize : 153.0) 0.02 OrthoFinder output from all 47 species
Spa_g32195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!